PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G045900.1
Common NamePHAVU_003G045800g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family MYB_related
Protein Properties Length: 247aa    MW: 27776.6 Da    PI: 8.7313
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G045900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.81e-171461146
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHH CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqk 46
                        +grWT+eEd++l+d+v+++G ++W++++++      Rt++++k++w +
  Phvul.003G045900.1 14 KGRWTPEEDKKLLDYVEKHGHRNWRLVPAKAAhlPQRTDNEIKNYWKT 61
                        79*************************98877777***********87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.8E-22670IPR009057Homeodomain-like
SuperFamilySSF466895.96E-16972IPR009057Homeodomain-like
PROSITE profilePS5129421.252967IPR017930Myb domain
SMARTSM007177.6E-141365IPR001005SANT/Myb domain
PfamPF002499.4E-161461IPR001005SANT/Myb domain
CDDcd001671.02E-141663No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MGRKACCEKL GLKKGRWTPE EDKKLLDYVE KHGHRNWRLV PAKAAHLPQR TDNEIKNYWK  60
TNIKKRLIRM SLDPITITHK TIKQNTFEGC GDGQDQSKDT INITHVAQWE RARFETEARG  120
SMLQVGSGSS NLSGLILSKI PTQPCLSSHS VSTEHKRVHN MYALVLTTNH DFRSSVSTLS  180
IPKLPAVSNI PQITNTESLL TYKADNNVME GCVSNLQDDD IMLAVEAFRT ARSESIEELF  240
NEFTPA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007153558.11e-174hypothetical protein PHAVU_003G045800g
TrEMBLV7C5T61e-174V7C5T6_PHAVU; Uncharacterized protein
STRINGGLYMA01G06181.11e-109(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13536826
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.12e-36myb domain protein 16